STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7KBK0_ARALLPectate lyase. (459 aa)    
Predicted Functional Partners:
D7KMZ4_ARALL
Uncharacterized protein.
   
  
 0.901
D7L3W6_ARALL
Pectinesterase family protein; In the C-terminal section; belongs to the pectinesterase family.
  
 
 0.895
D7M5G9_ARALL
Pectinesterase family protein; In the C-terminal section; belongs to the pectinesterase family.
  
 
 0.865
D7LNT6_ARALL
Pectinesterase.
  
 
 0.821
D7L6A5_ARALL
Pectinesterase.
  
  
 0.815
D7LDI2_ARALL
Pectinesterase; In the C-terminal section; belongs to the pectinesterase family.
  
  
 0.811
D7LSU7_ARALL
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family.
  
  
 0.805
D7M0I7_ARALL
Pectinesterase family protein.
  
  
 0.805
D7M0I8_ARALL
Pectinesterase family protein.
  
  
 0.804
D7M4F1_ARALL
Kinase.
   
  
 0.786
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.