STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7KBZ3_ARALLPredicted protein. (99 aa)    
Predicted Functional Partners:
D7KLJ9_ARALL
tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.842
D7KY75_ARALL
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.842
D7MHB4_ARALL
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.842
D7MTP0_ARALL
Homogentisate 1,2-dioxygenase.
  
 
 0.597
D7KES3_ARALL
Elongation factor 1-beta; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.559
D7LB80_ARALL
EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.559
D7LEB0_ARALL
Predicted protein.
   
 0.559
D7LEG0_ARALL
EF1_GNE domain-containing protein.
   
 0.559
D7LZ89_ARALL
Elongation factor 1B alpha-subunit 2; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.559
D7M4G0_ARALL
EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.559
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.