Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
D7KC08_ARALL | D7KE22_ARALL | D7KC08 | D7KE22 | ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase. | DNA ligase. | 0.959 |
D7KC08_ARALL | D7KEK7_ARALL | D7KC08 | D7KEK7 | ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase. | SAP domain-containing protein. | 0.999 |
D7KC08_ARALL | D7KHZ2_ARALL | D7KC08 | D7KHZ2 | ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase. | DNA ligase. | 0.959 |
D7KC08_ARALL | D7KUD3_ARALL | D7KC08 | D7KUD3 | ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase. | DNA ligase. | 0.995 |
D7KC08_ARALL | D7L2J5_ARALL | D7KC08 | D7L2J5 | ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase. | CbamoylP_synth_lsu-like_ATP-bd domain-containing protein. | 0.975 |
D7KC08_ARALL | D7L383_ARALL | D7KC08 | D7L383 | ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase. | Predicted protein. | 0.938 |
D7KC08_ARALL | D7MMS2_ARALL | D7KC08 | D7MMS2 | ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase. | DNA ligase. | 0.999 |
D7KC08_ARALL | D7MTJ4_ARALL | D7KC08 | D7MTJ4 | ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase. | Metallophos domain-containing protein. | 0.969 |
D7KC08_ARALL | D7MU75_ARALL | D7KC08 | D7MU75 | ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.969 |
D7KC08_ARALL | LHCB3 | D7KC08 | D7MU76 | ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.962 |
D7KE22_ARALL | D7KC08_ARALL | D7KE22 | D7KC08 | DNA ligase. | ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase. | 0.959 |
D7KE22_ARALL | D7KEK7_ARALL | D7KE22 | D7KEK7 | DNA ligase. | SAP domain-containing protein. | 0.950 |
D7KE22_ARALL | D7KHZ2_ARALL | D7KE22 | D7KHZ2 | DNA ligase. | DNA ligase. | 0.901 |
D7KE22_ARALL | D7KUD3_ARALL | D7KE22 | D7KUD3 | DNA ligase. | DNA ligase. | 0.934 |
D7KE22_ARALL | D7L2J5_ARALL | D7KE22 | D7L2J5 | DNA ligase. | CbamoylP_synth_lsu-like_ATP-bd domain-containing protein. | 0.889 |
D7KE22_ARALL | D7L383_ARALL | D7KE22 | D7L383 | DNA ligase. | Predicted protein. | 0.931 |
D7KE22_ARALL | D7MTJ4_ARALL | D7KE22 | D7MTJ4 | DNA ligase. | Metallophos domain-containing protein. | 0.576 |
D7KE22_ARALL | D7MU75_ARALL | D7KE22 | D7MU75 | DNA ligase. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.576 |
D7KE22_ARALL | LHCB3 | D7KE22 | D7MU76 | DNA ligase. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.576 |
D7KEK7_ARALL | D7KC08_ARALL | D7KEK7 | D7KC08 | SAP domain-containing protein. | ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase. | 0.999 |
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