STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7KC33_ARALLNon-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (427 aa)    
Predicted Functional Partners:
D7MPX6_ARALL
Uncharacterized protein.
    
 0.789
D7L5G2_ARALL
Uncharacterized protein.
      
 0.773
D7L3W3_ARALL
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 
 0.736
D7KKG7_ARALL
Tubby-like F-box protein; Belongs to the TUB family.
      
 0.680
MLO-2
MLO-like protein; May be involved in modulation of pathogen defense and leaf cell death.
      
 0.672
D7M9H5_ARALL
Uncharacterized protein.
    
 0.626
D7L9P2_ARALL
Tyrosine-protein phosphatase domain-containing protein.
    
 0.621
SEX4
Starch-excess 4.
    
 0.621
D7KAU3_ARALL
Protein DETOXIFICATION; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
      
 0.583
D7L5X0_ARALL
Uncharacterized protein.
   
0.530
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.