STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7KEG2_ARALLAuxin-responsive family protein. (147 aa)    
Predicted Functional Partners:
D7M048_ARALL
Uncharacterized protein.
      
 0.747
D7KFE5_ARALL
Uncharacterized protein.
  
   
 0.694
D7MFD6_ARALL
Predicted protein.
      
 0.651
D7LH64_ARALL
Methyltransf_11 domain-containing protein.
      
 0.582
D7MDD7_ARALL
Uncharacterized protein.
  
   
 0.566
D7LPK1_ARALL
Uncharacterized protein.
  
     0.515
D7MR09_ARALL
Expressed protein.
      
 0.511
D7MQP5_ARALL
Uncharacterized protein.
  
   
 0.509
IAA32
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
      
 0.499
D7MKZ4_ARALL
TIR domain-containing protein.
      
 0.499
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.