STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7KHV5_ARALLUncharacterized protein. (356 aa)    
Predicted Functional Partners:
D7M6H1_ARALL
Uncharacterized protein.
   
 0.891
D7MRU9_ARALL
Predicted protein.
   
 0.826
D7LUX2_ARALL
Uncharacterized protein.
  
 
 0.798
D7LZD4_ARALL
DUF1767 domain-containing protein.
    
 0.715
D7KDV8_ARALL
Uncharacterized protein.
  
 0.696
D7KGA7_ARALL
Uncharacterized protein.
  
 0.696
D7MBL2_ARALL
ATMUS81.
   
 0.675
D7MJI3_ARALL
ERCC4 domain-containing protein.
   
 0.675
D7KV42_ARALL
DNA polymerase.
  
 0.649
D7KDA6_ARALL
ATBARD1/BARD1.
   
 0.642
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.