STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7KIA4_ARALLEMB2719. (488 aa)    
Predicted Functional Partners:
D7MGM4_ARALL
PCI domain-containing protein.
   
 0.995
D7MPM6_ARALL
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.992
D7KDQ6_ARALL
PCI domain-containing protein.
   
 0.991
D7L4I0_ARALL
26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.991
D7LE78_ARALL
Adhesion regulating molecule family.
   
 0.991
D7MFL8_ARALL
Multiubiquitin chain binding protein MBP1.
   
 0.990
D7MGW6_ARALL
PCI domain-containing protein.
  
 0.989
D7MTD6_ARALL
PCI domain-containing protein.
  
 0.989
D7LRU7_ARALL
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.
   
 0.988
D7M286_ARALL
EMB2107.
   
 0.986
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.