STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7KJC5_ARALLAIG1-type G domain-containing protein. (330 aa)    
Predicted Functional Partners:
D7M3B8_ARALL
Uncharacterized protein.
      
 0.820
D7M837_ARALL
Predicted protein.
    
 0.810
D7LS85_ARALL
F-box domain-containing protein.
    
 0.806
D7LIC2_ARALL
Glutamate receptor; Glutamate-gated receptor that probably acts as non-selective cation channel; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
      
 0.793
D7KE66_ARALL
Uncharacterized protein.
      
 0.791
D7KGX5_ARALL
GDSL-motif lipase/hydrolase family protein; Belongs to the 'GDSL' lipolytic enzyme family.
      
 0.787
D7LYP8_ARALL
Predicted protein; Belongs to the peptidase S8 family.
    
 0.782
D7MCU1_ARALL
Uncharacterized protein.
      
 0.780
D7M2T9_ARALL
Pollen ole e 1 allergen and extensin family protein.
      
 0.778
D7MS76_ARALL
Predicted protein.
      
 0.778
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.