STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7KSW1_ARALLRespiratory burst oxidase. (941 aa)    
Predicted Functional Partners:
D7M0R2_ARALL
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 
 0.961
D7MFT5_ARALL
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.920
CPK6
Calcium-dependent protein kinase 6.
   
 
 0.900
D7MD17_ARALL
Calcium dependent kinase 5.
   
 
 0.879
CPK23
Calcium-dependent protein kinase 23.
   
 
 0.872
D7KND2_ARALL
C4-dicarboxylate transporter/malic acid transport family protein.
      
 0.862
D7M9H5_ARALL
Uncharacterized protein.
    
 
 0.859
D7L4X2_ARALL
Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond.
   
 
 0.834
CDPK6
Calcium-dependent protein kinase 6.
   
 
 0.819
D7MFD2_ARALL
PPM-type phosphatase domain-containing protein.
      
 0.775
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.