STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7KX07_ARALLPredicted protein. (905 aa)    
Predicted Functional Partners:
D7KPH1_ARALL
Uncharacterized protein.
  
     0.529
D7KXX7_ARALL
Uncharacterized protein.
  
     0.524
D7M5N9_ARALL
Uncharacterized protein.
  
     0.523
D7LLA0_ARALL
Uncharacterized protein.
  
     0.522
D7M3E8_ARALL
Kinase interacting family protein.
  
     0.518
D7M769_ARALL
Uncharacterized protein.
  
     0.515
D7MBC8_ARALL
M protein repeat-containing protein.
  
     0.515
D7M8F9_ARALL
Uncharacterized protein.
  
     0.512
D7KSW2_ARALL
Uncharacterized protein.
  
     0.507
D7LRG3_ARALL
Uncharacterized protein.
  
     0.505
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.