STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7KYE8_ARALLUncharacterized protein. (615 aa)    
Predicted Functional Partners:
D7KMH9_ARALL
Uncharacterized protein.
  
 
 0.866
D7LNX4_ARALL
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.852
D7KSM8_ARALL
Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.844
D7LZM2_ARALL
Uncharacterized protein.
   
 0.796
D7LT41_ARALL
Transferase family protein.
   
  
 0.789
D7LUF5_ARALL
Pectate lyase.
      
 0.760
D7M8Q5_ARALL
PPM-type phosphatase domain-containing protein.
   
 
 0.751
ATPHS2
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.747
D7KMQ0_ARALL
Uncharacterized protein; Belongs to the phosphohexose mutase family.
   
 0.738
D7KYD8_ARALL
Uncharacterized protein; Belongs to the phosphohexose mutase family.
   
 0.738
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.