STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7L0G3_ARALLPredicted protein. (96 aa)    
Predicted Functional Partners:
D7KRV1_ARALL
Uncharacterized protein.
   
 0.989
D7LMF8_ARALL
40S ribosomal protein S29.
   
 0.989
D7L6H2_ARALL
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.979
D7LWH0_ARALL
Predicted protein.
   
 
 0.975
D7L3B4_ARALL
60S ribosomal protein L36a/L44; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 
 0.966
D7L228_ARALL
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
   
 0.960
D7L303_ARALL
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.960
D7L8B4_ARALL
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.960
D7LXU5_ARALL
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
   
 0.960
D7M2W3_ARALL
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.960
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.