STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7L0M1_ARALLUncharacterized protein. (61 aa)    
Predicted Functional Partners:
D7KCP8_ARALL
Binding protein.
      
 0.891
D7KCP7_ARALL
Glycine-rich protein.
      
 0.873
D7MXQ3_ARALL
Germin-like protein.
      
 0.872
D7KQ00_ARALL
Oxidoreductase.
   
  
 0.819
D7KIB7_ARALL
Predicted protein.
      
 0.780
D7KFM0_ARALL
EMB2279.
      
 0.775
D7KZ53_ARALL
Uncharacterized protein.
      
 0.771
D7LCC7_ARALL
Uncharacterized protein.
      
 0.771
D7KT75_ARALL
Knot1 domain-containing protein; Belongs to the DEFL family.
      
 0.762
D7LW64_ARALL
ATMBF1B/MBF1B.
      
 0.762
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.