STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7L3B3_ARALLCRIB domain-containing protein. (198 aa)    
Predicted Functional Partners:
D7KUQ3_ARALL
Rho GDP-dissociation inhibitor family protein.
      
 0.820
D7KN89_ARALL
Rho GDP-dissociation inhibitor family protein.
      
 0.818
D7LWJ0_ARALL
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
      
 0.778
D7LPE6_ARALL
Protein kinase domain-containing protein.
      
 0.771
D7LTT3_ARALL
Uncharacterized protein.
   
 0.763
D7L735_ARALL
Phosphatidylinositol 4-phosphate 5-kinase.
      
 0.762
D7LVL9_ARALL
Phosphatidylinositol 4-phosphate 5-kinase.
      
 0.748
D7KHV2_ARALL
RWD domain-containing protein.
      
 0.738
D7L724_ARALL
Rho GDP-dissociation inhibitor family protein.
      
 0.737
D7LU22_ARALL
Na_H_Exchanger domain-containing protein.
      
 0.711
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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