STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7L3W6_ARALLPectinesterase family protein; In the C-terminal section; belongs to the pectinesterase family. (671 aa)    
Predicted Functional Partners:
D7M6R5_ARALL
Pectate lyase.
  
 
 0.929
D7LQ55_ARALL
Pectate lyase.
  
 
 0.905
D7KBK0_ARALL
Pectate lyase.
  
 
 0.895
D7MFI2_ARALL
FAD-binding domain-containing protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
     
 0.878
D7MAD9_ARALL
Predicted protein.
      
 0.874
D7KZI9_ARALL
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 
 0.814
D7LFY2_ARALL
Invertase/pectin methylesterase inhibitor family protein.
   
  
 0.800
D7LSU8_ARALL
Invertase/pectin methylesterase inhibitor family protein.
   
 0.790
D7MPI0_ARALL
Invertase/pectin methylesterase inhibitor family protein.
   
  
 0.784
D7LB35_ARALL
Invertase/pectin methylesterase inhibitor family protein.
      
 0.773
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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