STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7L9Z3_ARALLPKS_ER domain-containing protein. (364 aa)    
Predicted Functional Partners:
D7KDL5_ARALL
Epimerase domain-containing protein.
  
 
 0.985
D7L540_ARALL
ALDH2C4; Belongs to the aldehyde dehydrogenase family.
  
 
 0.943
D7MBN5_ARALL
Ferulate-5-hydroxylase; Belongs to the cytochrome P450 family.
     
 0.893
D7M3W4_ARALL
Uncharacterized protein.
  
  
 0.850
ATOMT1
O-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.
   
 
 0.846
ATOMT1-2
O-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.
   
 
 0.846
D7LC57_ARALL
Cinnamate-4-hydroxylase; Belongs to the cytochrome P450 family.
   
  
 0.793
D7LFV5_ARALL
CYP98A3; Belongs to the cytochrome P450 family.
   
  
 0.774
D7MFS3_ARALL
Uncharacterized protein.
  
  
 0.771
D7MFB7_ARALL
Uncharacterized protein.
     
 0.766
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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