STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7LE17_ARALLTransferase. (942 aa)    
Predicted Functional Partners:
D7KDM5_ARALL
Predicted protein.
    
 0.917
D7MKT4_ARALL
BHLH domain-containing protein.
      
 0.777
D7LXJ5_ARALL
Uncharacterized protein.
      
 0.769
D7KZM5_ARALL
Prenyltransferase.
   
  
 0.766
D7LTQ8_ARALL
SAM_MPBQ_MSBQ_MT domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ/MBSQ MT family.
      
 0.729
D7KZ32_ARALL
Gamma-tocopherol methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. gTMT family.
    
 
 0.728
D7KBF9_ARALL
Emp24/gp25L/p24 family protein.
    
 
 0.701
D7KC62_ARALL
Emp24/gp25L/p24 family protein.
    
 
 0.701
D7KJR9_ARALL
Emp24/gp25L/p24 family protein.
    
 
 0.701
D7KKV6_ARALL
Emp24/gp25L/p24 family protein.
    
 
 0.701
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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