STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7LGZ9_ARALLProtein DETOXIFICATION; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. (473 aa)    
Predicted Functional Partners:
D7MR13_ARALL
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family.
      
 0.872
D7LKJ6_ARALL
Uncharacterized protein.
      
 0.802
D7L926_ARALL
Pectinesterase; In the C-terminal section; belongs to the pectinesterase family.
      
 0.795
D7LWI2_ARALL
Uncharacterized protein.
      
 0.793
D7LFQ2_ARALL
Uncharacterized protein.
      
 0.789
D7LKJ7_ARALL
Uncharacterized protein.
      
 0.777
D7LEZ6_ARALL
Uncharacterized protein; Belongs to the glycosyltransferase 2 family.
      
 0.773
D7MR14_ARALL
Pectinesterase.
      
 0.750
D7MW43_ARALL
Pectinesterase domain-containing protein.
      
 0.750
D7M181_ARALL
Uncharacterized protein.
      
 0.729
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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