STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7LJF2_ARALLANAC042. (273 aa)    
Predicted Functional Partners:
DREB2A
DRE-binding protein 2A.
  
   
 0.807
D7LTH1_ARALL
Cytochrome P450 90B1; Belongs to the cytochrome P450 family.
     
 0.723
D7LC85_ARALL
CYP71A12; Belongs to the cytochrome P450 family.
   
 
 0.700
D7KTN4_ARALL
GRAS domain-containing protein; Belongs to the GRAS family.
  
 
 
 0.661
D7MJT4_ARALL
DSBA oxidoreductase family protein.
   
  
 0.639
D7LX13_ARALL
GRAS domain-containing protein; Belongs to the GRAS family.
  
 
 
 0.579
D7KCL1_ARALL
GRAS domain-containing protein; Belongs to the GRAS family.
  
 
 
 0.569
D7L023_ARALL
Aminotran_5 domain-containing protein.
    
 0.551
D7LIU7_ARALL
F-box_5 domain-containing protein.
  
   
 0.546
D7LYE3_ARALL
Uncharacterized protein.
  
     0.530
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.