STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7LJJ3_ARALLPhytocyanin domain-containing protein. (177 aa)    
Predicted Functional Partners:
D7LGG6_ARALL
Calcium ion binding protein.
      
 0.817
D7LK84_ARALL
Uncharacterized protein.
   
 0.812
D7KGC0_ARALL
Uncharacterized protein.
   
  
 0.797
D7LGX1_ARALL
At2g27385.
      
 0.789
D7MK37_ARALL
Protease inhibitor/seed storage/lipid transfer protein family protein.
    
 0.789
D7LTT1_ARALL
TPR_REGION domain-containing protein.
   
  
 0.788
D7MJD1_ARALL
Uncharacterized protein.
    
 0.787
D7KU70_ARALL
AAI domain-containing protein.
      
 0.762
D7MQK9_ARALL
Protease inhibitor/seed storage/lipid transfer protein family protein; Belongs to the plant LTP family.
    
 0.757
D7MBL1_ARALL
Protease inhibitor/seed storage/lipid transfer protein family protein.
      
 0.738
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.