STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7LM17_ARALLDUF569 domain-containing protein. (303 aa)    
Predicted Functional Partners:
D7MHU7_ARALL
Uncharacterized protein.
   
 
 0.806
D7LS75_ARALL
LIM domain-containing protein.
    
 
 0.780
D7KP73_ARALL
LIM domain-containing protein.
    
 
 0.778
D7LD90_ARALL
LIM domain-containing protein.
    
 
 0.775
D7MP49_ARALL
MATH domain-containing protein.
    
 0.762
D7MKH3_ARALL
ATFIM1.
   
 
 0.747
D7MFZ3_ARALL
Actin binding protein; Belongs to the actin-binding proteins ADF family.
      
 0.738
D7KDD1_ARALL
MATH domain-containing protein.
    
 0.689
D7MRQ4_ARALL
Predicted protein.
    
 0.689
D7LIZ0_ARALL
Predicted protein.
  
 
 0.676
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.