STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7LMB2_ARALLAmine oxidase. (687 aa)    
Predicted Functional Partners:
D7MCI6_ARALL
ATPAO5.
     
 0.956
D7MD97_ARALL
Uncharacterized protein.
     
 0.930
D7L2V8_ARALL
Uncharacterized protein.
     
 0.910
D7KT07_ARALL
ATPAO4.
   
 
 0.899
D7LJW9_ARALL
ATPAO2.
   
 
 0.899
D7LWA1_ARALL
ATPAO3.
   
 
 0.898
D7KZ00_ARALL
EMB2196.
     
  0.800
D7KNJ3_ARALL
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
 0.752
D7LRH8_ARALL
ALDH2B4; Belongs to the aldehyde dehydrogenase family.
   
 0.752
D7KLE6_ARALL
ALDH7B4; Belongs to the aldehyde dehydrogenase family.
   
 0.751
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.