STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7LSR9_ARALLMetal ion binding protein. (1254 aa)    
Predicted Functional Partners:
D7M7V3_ARALL
Predicted protein.
      
 0.868
D7KK85_ARALL
PPM-type phosphatase domain-containing protein.
      
 0.867
D7MLU2_ARALL
Dual specificity protein phosphatase family protein.
      
 0.867
D7MDQ2_ARALL
Mitochondrial substrate carrier family protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.817
D7M153_ARALL
Tyrosine specific protein phosphatase family protein.
      
 0.797
PHS1
Propyzamide-hypersensitive 1.
      
 0.793
D7LFN6_ARALL
Tyrosine specific protein phosphatase family protein.
      
 0.778
D7MJM4_ARALL
Uncharacterized protein.
      
 0.778
D7LT28_ARALL
Uncharacterized protein.
      
 0.777
D7M852_ARALL
Uncharacterized protein.
      
 0.777
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.