Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
D7L1S4_ARALL | D7L2R9_ARALL | D7L1S4 | D7L2R9 | Sm domain-containing protein. | RRM domain-containing protein. | 0.963 |
D7L1S4_ARALL | D7L2U7_ARALL | D7L1S4 | D7L2U7 | Sm domain-containing protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.997 |
D7L1S4_ARALL | D7L3A5_ARALL | D7L1S4 | D7L3A5 | Sm domain-containing protein. | Splicing factor subunit; Belongs to the SF3B5 family. | 0.968 |
D7L1S4_ARALL | D7LV19_ARALL | D7L1S4 | D7LV19 | Sm domain-containing protein. | Predicted protein. | 0.967 |
D7L1S4_ARALL | D7M1W5_ARALL | D7L1S4 | D7M1W5 | Sm domain-containing protein. | Predicted protein. | 0.953 |
D7L1S4_ARALL | D7M3A0_ARALL | D7L1S4 | D7M3A0 | Sm domain-containing protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.993 |
D7L1S4_ARALL | D7M4G9_ARALL | D7L1S4 | D7M4G9 | Sm domain-containing protein. | RNA recognition motif-containing protein. | 0.963 |
D7L1S4_ARALL | D7MER2_ARALL | D7L1S4 | D7MER2 | Sm domain-containing protein. | PSP domain-containing protein. | 0.953 |
D7L1S4_ARALL | D7MH32_ARALL | D7L1S4 | D7MH32 | Sm domain-containing protein. | Splicing factor subunit; Belongs to the SF3B5 family. | 0.968 |
D7L1S4_ARALL | D7MR97_ARALL | D7L1S4 | D7MR97 | Sm domain-containing protein. | TOG domain-containing protein. | 0.983 |
D7L2R9_ARALL | D7L1S4_ARALL | D7L2R9 | D7L1S4 | RRM domain-containing protein. | Sm domain-containing protein. | 0.963 |
D7L2R9_ARALL | D7L2U7_ARALL | D7L2R9 | D7L2U7 | RRM domain-containing protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.964 |
D7L2R9_ARALL | D7L3A5_ARALL | D7L2R9 | D7L3A5 | RRM domain-containing protein. | Splicing factor subunit; Belongs to the SF3B5 family. | 0.978 |
D7L2R9_ARALL | D7LV19_ARALL | D7L2R9 | D7LV19 | RRM domain-containing protein. | Predicted protein. | 0.958 |
D7L2R9_ARALL | D7M1W5_ARALL | D7L2R9 | D7M1W5 | RRM domain-containing protein. | Predicted protein. | 0.963 |
D7L2R9_ARALL | D7M3A0_ARALL | D7L2R9 | D7M3A0 | RRM domain-containing protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.812 |
D7L2R9_ARALL | D7MER2_ARALL | D7L2R9 | D7MER2 | RRM domain-containing protein. | PSP domain-containing protein. | 0.963 |
D7L2R9_ARALL | D7MH32_ARALL | D7L2R9 | D7MH32 | RRM domain-containing protein. | Splicing factor subunit; Belongs to the SF3B5 family. | 0.978 |
D7L2R9_ARALL | D7MR97_ARALL | D7L2R9 | D7MR97 | RRM domain-containing protein. | TOG domain-containing protein. | 0.978 |
D7L2U7_ARALL | D7L1S4_ARALL | D7L2U7 | D7L1S4 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Sm domain-containing protein. | 0.997 |
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