STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7LY26_ARALLF-box domain-containing protein. (354 aa)    
Predicted Functional Partners:
D7MGW3_ARALL
Chromomethylase 2.
      
 0.721
D7LEE8_ARALL
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
      
 0.720
D7KU36_ARALL
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
      
 0.719
D7LJ45_ARALL
ENDO3c domain-containing protein.
      
 0.711
D7KHA7_ARALL
F-box domain-containing protein.
  
     0.528
D7LCM1_ARALL
F-box protein At2g21930.
  
     0.528
D7LU50_ARALL
Predicted protein.
  
     0.522
D7KJS7_ARALL
F-box family protein.
  
     0.521
D7MS69_ARALL
F-box domain-containing protein.
  
     0.520
D7LSI8_ARALL
F-box domain-containing protein.
  
     0.517
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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