STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7LZU7_ARALLPolygalacturonase inhibiting protein 1. (332 aa)    
Predicted Functional Partners:
D7M1K6_ARALL
Zinc finger family protein.
    
 0.773
D7KK61_ARALL
Zinc finger family protein.
    
 0.751
D7MFD6_ARALL
Predicted protein.
  
 
 0.720
D7LKJ7_ARALL
Uncharacterized protein.
      
 0.677
ALMT1
Al-activated malate transporter 1.
      
 0.669
D7MJD1_ARALL
Uncharacterized protein.
    
 0.661
D7LRA0_ARALL
Uncharacterized protein; Belongs to the cytochrome P450 family.
     
 0.655
D7M7B4_ARALL
Pentatricopeptide repeat-containing protein.
   
  
 0.655
D7KTM6_ARALL
Glycosyl hydrolase family 17 protein; Belongs to the glycosyl hydrolase 17 family.
      
 0.583
D7LH64_ARALL
Methyltransf_11 domain-containing protein.
   
  
 0.548
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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