STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7M0B5_ARALLPredicted protein. (189 aa)    
Predicted Functional Partners:
D7KPN7_ARALL
Methyltransferase.
  
     0.534
D7KDE6_ARALL
Methyltransferase.
  
     0.533
D7KIG1_ARALL
Methyltransferase.
  
     0.533
D7LY54_ARALL
Methyltransferase.
  
     0.533
D7MH30_ARALL
Methyltransferase.
  
     0.533
D7L4S0_ARALL
Uncharacterized protein.
  
     0.532
D7LD81_ARALL
Methyltransferase.
  
     0.532
D7M5L0_ARALL
Methyltransferase.
  
     0.532
D7L3A3_ARALL
Methyltransferase.
  
     0.531
D7M6J4_ARALL
Methyltransferase.
  
     0.531
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.