STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7M0J7_ARALLExpressed protein. (234 aa)    
Predicted Functional Partners:
D7KT82_ARALL
Family II extracellular lipase 5; Belongs to the 'GDSL' lipolytic enzyme family.
   
  
 0.876
D7L1J5_ARALL
Uncharacterized protein.
  
  
 0.782
D7KMR2_ARALL
Uncharacterized protein.
   
  
 0.776
D7KD44_ARALL
Oxidoreductase.
      
 0.771
D7M0V6_ARALL
PHD domain-containing protein.
      
 0.771
D7M272_ARALL
Predicted protein.
      
 0.762
D7KT83_ARALL
T4O12.15; Belongs to the 'GDSL' lipolytic enzyme family.
   
  
 0.748
D7MLC8_ARALL
Uncharacterized protein.
   
  
 0.737
D7MV41_ARALL
Uncharacterized protein.
   
  
 0.723
D7L7K9_ARALL
Uncharacterized protein.
      
 0.720
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.