STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7M240_ARALLTranscription factor/ transcription regulator. (325 aa)    
Predicted Functional Partners:
D7LGU8_ARALL
BHLH domain-containing protein.
  
 
 
 0.585
D7LRP6_ARALL
Uncharacterized protein.
  
     0.515
D7LZ91_ARALL
Spermine synthase.
      
 0.497
D7KS59_ARALL
Uncharacterized protein.
  
     0.490
D7LUQ1_ARALL
Lectin_legB domain-containing protein; Belongs to the leguminous lectin family.
  
     0.487
D7MMI2_ARALL
Uncharacterized protein.
  
     0.481
D7KUY3_ARALL
VARLMGL domain-containing protein.
  
     0.476
D7LI13_ARALL
WRC domain-containing protein.
  
     0.469
D7MCB3_ARALL
Hydroxyproline-rich glycoprotein family protein.
  
     0.469
D7MRH3_ARALL
Uncharacterized protein.
  
     0.461
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.