STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7M8Z1_ARALLUncharacterized protein; Belongs to the glycosyltransferase 2 family. (732 aa)    
Predicted Functional Partners:
D7MP41_ARALL
Pectinesterase.
   
 
 0.730
D7KMF8_ARALL
Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family.
    
 0.688
D7LWT4_ARALL
ATCSLA09.
      
 0.673
D7KWN6_ARALL
Uncharacterized protein.
    
 
 0.657
D7KCR1_ARALL
Aspartate-glutamate racemase family.
      
 0.558
D7LT84_ARALL
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
      
 0.542
D7LSA5_ARALL
Glycoside hydrolase family 28 protein.
    
 0.534
D7KUQ4_ARALL
LRRNT_2 domain-containing protein.
    
 0.530
D7L535_ARALL
Predicted protein.
    
 
 0.522
D7L3W8_ARALL
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family.
    
 
 0.507
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.