STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7MET2_ARALLATFMN. (380 aa)    
Predicted Functional Partners:
D7M1B1_ARALL
FAD_syn domain-containing protein.
     
 0.993
D7LI15_ARALL
Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family.
  
 
 0.991
D7M1Q7_ARALL
FAD_syn domain-containing protein.
     
 0.990
D7L4J1_ARALL
Lumazine-binding family protein.
  
 
 0.986
D7LKV3_ARALL
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
  
 
 0.979
D7KAJ9_ARALL
Purple acid phosphatase.
  
 
 0.956
D7KCI8_ARALL
Purple acid phosphatase.
  
 
 0.956
D7LPW7_ARALL
Purple acid phosphatase.
  
 
 0.956
D7LPW6_ARALL
Purple acid phosphatase.
  
 
 0.952
D7KXP7_ARALL
Uncharacterized protein.
  
 0.937
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.