STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7MF27_ARALLUncharacterized protein. (374 aa)    
Predicted Functional Partners:
D7M410_ARALL
Uncharacterized protein.
  
  
 0.603
D7MVR7_ARALL
DUF569 domain-containing protein.
  
  
  0.543
D7KXT0_ARALL
DUF569 domain-containing protein.
  
  
  0.529
D7KY91_ARALL
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
  
  0.522
D7L5K6_ARALL
LEA_2 domain-containing protein.
  
 
  0.515
D7LYU5_ARALL
Lipase class 3 family protein.
  
     0.515
D7MBQ3_ARALL
Armadillo/beta-catenin repeat family protein.
  
     0.511
D7MI86_ARALL
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
 
   0.509
D7MN03_ARALL
Uncharacterized protein.
  
     0.509
D7KJM4_ARALL
Uncharacterized protein.
  
     0.507
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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