STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7MIU0_ARALLDDA1 domain-containing protein. (101 aa)    
Predicted Functional Partners:
D7MRZ6_ARALL
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.979
D7LY25_ARALL
Light-mediated development protein DET1.
    
 
 0.974
D7M0E7_ARALL
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.965
D7LN83_ARALL
Uncharacterized protein.
    
 0.961
DDB1A
UV-damaged DNA-binding protein 1A.
    
 0.961
D7M7T5_ARALL
Uncharacterized protein.
    
 0.961
D7MFF3_ARALL
CPSF_A domain-containing protein.
    
 0.961
D7LN71_ARALL
Predicted protein; Belongs to the cullin family.
    
 0.959
D7LN85_ARALL
Predicted protein; Belongs to the cullin family.
    
 0.959
D7MSV0_ARALL
Uncharacterized protein.
    
 
 0.931
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.