STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7MNC2_ARALLXylose isomerase. (477 aa)    
Predicted Functional Partners:
D7MPD2_ARALL
Xylulose kinase.
  
 
 0.995
D7MRL0_ARALL
PKS_ER domain-containing protein.
     
 0.976
D7L6G0_ARALL
Phosphotransferase.
     
 0.949
D7KFZ9_ARALL
Phosphotransferase.
     
 0.947
D7LAV7_ARALL
Phosphotransferase.
     
 0.947
D7M9Z9_ARALL
Phosphotransferase.
     
 0.947
D7MD47_ARALL
Phosphotransferase.
     
 0.947
D7KBX4_ARALL
Phosphotransferase.
     
 0.940
D7KFA0_ARALL
PfkB-type carbohydrate kinase family protein; Belongs to the carbohydrate kinase PfkB family.
    
 0.920
D7KFA1_ARALL
PfkB-type carbohydrate kinase family protein; Belongs to the carbohydrate kinase PfkB family.
    
 0.920
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.