STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7MP09_ARALLEMB2746. (927 aa)    
Predicted Functional Partners:
D7KEU5_ARALL
Uncharacterized protein.
   
 0.993
D7M2D9_ARALL
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.981
D7M2E1_ARALL
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.981
D7KYY3_ARALL
Predicted protein.
   
 0.976
D7KFJ1_ARALL
Cleavage stimulation factor 77.
   
 0.965
D7LKJ8_ARALL
Uncharacterized protein.
   
 0.965
D7M5T6_ARALL
WD_REPEATS_REGION domain-containing protein.
   
 0.965
D7L5Y0_ARALL
Fip1 motif-containing protein.
    
 0.964
D7MNZ1_ARALL
Fip1 domain-containing protein.
    
 0.964
D7KRM7_ARALL
Uncharacterized protein.
   
 0.957
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.