STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UVR8UVB-resistance 8. (440 aa)    
Predicted Functional Partners:
D7LFN5_ARALL
Uncharacterized protein.
    
 
 0.998
D7M2C6_ARALL
Nucleotide binding protein.
    
 
 0.998
D7MRP4_ARALL
WD_REPEATS_REGION domain-containing protein.
    
 
 0.965
D7MDA5_ARALL
HTH myb-type domain-containing protein.
    
 0.733
CASP2_ARALL
Casparian strip membrane protein 2; Regulates membrane-cell wall junctions and localised cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion (By similarity).
      
 0.729
D7MKU9_ARALL
Protein ROOT HAIR DEFECTIVE 3 homolog; Probable GTP-binding protein that may be involved in cell development; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.
      
 0.729
ELIP1
Early light-inducable protein.
      
 0.722
D7M3N8_ARALL
BZIP domain-containing protein.
    
 
 0.722
D7M4F4_ARALL
Carbon-nitrogen hydrolase family protein.
      
 0.720
D7KC53_ARALL
Uncharacterized protein; Belongs to the peptidase A1 family.
      
 0.703
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.