STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7MRC2_ARALLUncharacterized protein. (551 aa)    
Predicted Functional Partners:
D7MP35_ARALL
ATSDAT.
      
 0.665
D7MB36_ARALL
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.
    
 
 0.660
D7LPE6_ARALL
Protein kinase domain-containing protein.
      
 0.644
D7KLF1_ARALL
TAFII21.
   
 
 0.576
D7KM44_ARALL
Uncharacterized protein.
   
 
 0.576
UBP22
Ubiquitinyl hydrolase 1.
    
   0.555
D7KFF4_ARALL
TFIID_20kDa domain-containing protein.
    
 
 0.554
TAFII58
Tata-associated factor II 58.
    
 
 0.554
D7LAC5_ARALL
FAT domain-containing protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.532
D7LQH1_ARALL
Predicted protein.
   
 
 0.532
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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