STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0EVZ1_9BRASUncharacterized protein. (454 aa)    
Predicted Functional Partners:
R0G4W0_9BRAS
Uncharacterized protein.
    
 
 0.881
R0FEV8_9BRAS
Uncharacterized protein.
      
 0.841
R0GY08_9BRAS
GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
      
 0.839
R0FKA3_9BRAS
Uncharacterized protein.
      
 0.775
R0GWX1_9BRAS
Longin domain-containing protein.
      
 0.773
R0IAY8_9BRAS
Uncharacterized protein.
      
 0.771
R0G8A0_9BRAS
Uncharacterized protein.
    
 0.769
R0G9I8_9BRAS
Uncharacterized protein.
    
 
 0.738
R0HNS1_9BRAS
PPM-type phosphatase domain-containing protein.
   
  
 0.707
R0G080_9BRAS
Uncharacterized protein.
      
 0.702
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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