STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0F0I5_9BRASUncharacterized protein. (229 aa)    
Predicted Functional Partners:
R0H0C4_9BRAS
Uncharacterized protein.
      
 0.910
R0GC29_9BRAS
Uncharacterized protein.
      
 0.778
R0GQB3_9BRAS
3-ketoacyl-CoA synthase.
      
 0.773
R0HFC2_9BRAS
Uncharacterized protein.
      
 0.760
R0GTY4_9BRAS
PlsC domain-containing protein.
      
 0.732
R0FK70_9BRAS
GP-PDE domain-containing protein.
      
 0.710
R0I5H5_9BRAS
Uncharacterized protein.
      
 0.621
R0F7I5_9BRAS
Uncharacterized protein.
      
 0.562
R0GND6_9BRAS
Uncharacterized protein.
      
 0.562
R0GQH6_9BRAS
Uncharacterized protein.
      
 0.562
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.