STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0F144_9BRASUncharacterized protein; Belongs to the GDA1/CD39 NTPase family. (748 aa)    
Predicted Functional Partners:
R0G001_9BRAS
Uncharacterized protein.
      
 0.840
R0GTI5_9BRAS
PUM-HD domain-containing protein.
      
 0.809
R0FKA3_9BRAS
Uncharacterized protein.
      
 0.803
R0HB02_9BRAS
Uncharacterized protein.
   
 
 0.778
R0G0I5_9BRAS
Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.
      
 0.772
R0GPQ1_9BRAS
Uncharacterized protein.
      
 0.760
R0I4W7_9BRAS
PHD domain-containing protein.
      
 0.731
R0HBK9_9BRAS
GST N-terminal domain-containing protein.
      
 0.702
R0GUA9_9BRAS
Uncharacterized protein.
      
 0.700
R0GVW0_9BRAS
Uncharacterized protein.
      
 0.689
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.