STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0F2E5_9BRASUncharacterized protein. (373 aa)    
Predicted Functional Partners:
R0EV95_9BRAS
Uncharacterized protein.
      
 0.912
R0HTF1_9BRAS
DUF4283 domain-containing protein.
      
 0.881
R0GYK0_9BRAS
Rhodanese domain-containing protein.
      
 0.840
R0HN40_9BRAS
RNase H domain-containing protein.
      
 0.839
R0H6C8_9BRAS
Peptidase C50 domain-containing protein.
      
 0.771
R0GMU2_9BRAS
Uncharacterized protein.
      
 0.760
R0HVN8_9BRAS
Uncharacterized protein.
      
 0.710
R0GH17_9BRAS
Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.
   
    0.616
R0I821_9BRAS
Uncharacterized protein.
   
    0.533
R0IBN8_9BRAS
Uncharacterized protein.
   
    0.533
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.