STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0FBX1_9BRASUncharacterized protein. (341 aa)    
Predicted Functional Partners:
R0H4Q6_9BRAS
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
  
 0.786
R0GPV4_9BRAS
Uncharacterized protein; Belongs to the cytochrome P450 family.
      
 0.769
R0F4B7_9BRAS
Uncharacterized protein.
   
  
 0.713
R0GJQ0_9BRAS
Uncharacterized protein.
      
 0.701
R0F872_9BRAS
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
      
 0.688
R0HKZ2_9BRAS
PlsC domain-containing protein.
   
  
 0.552
R0I7E3_9BRAS
PlsC domain-containing protein.
   
  
 0.552
R0HSZ8_9BRAS
ABC transporter domain-containing protein.
   
  
 0.541
R0ICE8_9BRAS
3-ketoacyl-CoA synthase.
      
 0.479
R0ISG7_9BRAS
Uncharacterized protein.
      
 0.478
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.