STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0FCG4_9BRASUncharacterized protein. (1611 aa)    
Predicted Functional Partners:
R0GM59_9BRAS
B30.2/SPRY domain-containing protein.
    
 0.891
R0HXN1_9BRAS
WD_REPEATS_REGION domain-containing protein.
    
 0.870
R0FQR2_9BRAS
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.806
R0IHK8_9BRAS
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.806
R0HSY4_9BRAS
Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.
      
 0.772
R0G265_9BRAS
Uncharacterized protein.
    
 0.719
R0HAN4_9BRAS
Uncharacterized protein.
    
 0.710
R0I0L4_9BRAS
Uncharacterized protein.
  
 
  0.557
R0F4A4_9BRAS
Uncharacterized protein.
    
 0.546
R0FEJ1_9BRAS
Uncharacterized protein.
    
 0.546
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.