STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0FMF5_9BRASPPR_long domain-containing protein. (618 aa)    
Predicted Functional Partners:
R0EWW7_9BRAS
Uncharacterized protein.
      
 0.862
R0HT58_9BRAS
PORR domain-containing protein.
      
 0.841
R0GES8_9BRAS
Uncharacterized protein.
    
 
 0.816
R0G3F5_9BRAS
LAGLIDADG_2 domain-containing protein.
  
   
 0.778
R0I169_9BRAS
Uncharacterized protein.
    
 
 0.778
R0IAN1_9BRAS
Intron_maturas2 domain-containing protein.
      
 0.775
R0F220_9BRAS
Uncharacterized protein.
      
 0.760
R0H2Y0_9BRAS
Uncharacterized protein.
      
 0.760
R0IC07_9BRAS
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.731
R0GYN1_9BRAS
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.711
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.