STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0FNV8_9BRASUncharacterized protein. (550 aa)    
Predicted Functional Partners:
R0GMU0_9BRAS
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 
 0.779
R0I9Z2_9BRAS
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 
 0.779
R0H3S5_9BRAS
Uncharacterized protein.
  
 
 0.778
R0GV48_9BRAS
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 
 0.776
R0HN90_9BRAS
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 
 0.776
R0I338_9BRAS
Oxidored_FMN domain-containing protein.
   
 
 0.746
R0HZI1_9BRAS
Oxidored_FMN domain-containing protein.
   
 
 0.701
R0I774_9BRAS
Oxidored_FMN domain-containing protein.
   
 
 0.701
R0IPP8_9BRAS
Oxidored_FMN domain-containing protein.
   
 
 0.701
R0F3K6_9BRAS
Carrier domain-containing protein.
  
 0.673
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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