STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0FQZ7_9BRASExpansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily. (260 aa)    
Predicted Functional Partners:
R0HJC2_9BRAS
Pectate_lyase_3 domain-containing protein; Belongs to the glycosyl hydrolase 28 family.
    
 0.700
R0GS79_9BRAS
Endoglucanase.
   
 0.671
R0FLH1_9BRAS
Uncharacterized protein.
   
 0.658
R0HJS9_9BRAS
Uncharacterized protein.
    
 0.643
R0G4E3_9BRAS
Pectate_lyase_3 domain-containing protein.
      
 0.613
R0HJ94_9BRAS
COBRA-like protein; Belongs to the COBRA family.
  
   
 0.607
R0GVW2_9BRAS
Uncharacterized protein.
    
 0.605
R0HHW9_9BRAS
PMEI domain-containing protein.
      
 0.576
R0IA84_9BRAS
Uncharacterized protein.
    
 0.506
R0EYF9_9BRAS
PMEI domain-containing protein.
      
 0.482
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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