STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0FV42_9BRASUncharacterized protein; Belongs to the chaperonin (HSP60) family. (583 aa)    
Predicted Functional Partners:
R0H905_9BRAS
Uncharacterized protein; Belongs to the GroES chaperonin family.
 
 
 0.856
R0I4E0_9BRAS
Uncharacterized protein.
   
 0.850
R0HK18_9BRAS
Uncharacterized protein; Belongs to the heat shock protein 70 family.
  
 0.826
R0H3E1_9BRAS
Uncharacterized protein; Belongs to the heat shock protein 70 family.
  
 0.800
R0F372_9BRAS
RING-type E3 ubiquitin transferase.
      
 0.775
R0GBW3_9BRAS
CS domain-containing protein.
   
 
 0.768
R0FA33_9BRAS
CS domain-containing protein.
   
 
 0.725
R0FTS6_9BRAS
Uncharacterized protein; Belongs to the GroES chaperonin family.
  
 
 0.716
R0HLZ3_9BRAS
Uncharacterized protein.
  
 
 0.716
R0GMN4_9BRAS
Uncharacterized protein; Belongs to the GroES chaperonin family.
  
 
 0.715
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.