STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0FYM4_9BRASUncharacterized protein; Belongs to the synaptobrevin family. (221 aa)    
Predicted Functional Partners:
R0GDB3_9BRAS
t-SNARE coiled-coil homology domain-containing protein.
   
 0.924
R0G672_9BRAS
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.905
R0HQX5_9BRAS
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.820
R0HKE6_9BRAS
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.814
R0HBZ6_9BRAS
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.813
R0GTZ2_9BRAS
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.812
R0GU11_9BRAS
t-SNARE coiled-coil homology domain-containing protein.
    
 0.812
R0H7M2_9BRAS
t-SNARE coiled-coil homology domain-containing protein.
   
 0.807
R0F6N5_9BRAS
t-SNARE coiled-coil homology domain-containing protein.
    
 0.800
R0FGU8_9BRAS
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.800
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.