STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0G2S4_9BRASThioredoxin domain-containing protein. (301 aa)    
Predicted Functional Partners:
R0GRT9_9BRAS
Thioredoxin domain-containing protein.
      
 0.771
R0EVY7_9BRAS
Uncharacterized protein.
      
 0.734
R0GTV3_9BRAS
Uncharacterized protein; Belongs to the protein disulfide isomerase family.
      
 0.726
R0HXX3_9BRAS
Uncharacterized protein.
      
 0.702
R0F8R6_9BRAS
Uncharacterized protein.
      
 0.701
R0FQR6_9BRAS
Uncharacterized protein.
      
 0.576
R0FYJ0_9BRAS
Uncharacterized protein.
      
 0.576
R0HRD5_9BRAS
Uncharacterized protein; Belongs to the ClpA/ClpB family.
      
 0.561
R0HTA5_9BRAS
Uncharacterized protein.
      
 0.561
R0HSG8_9BRAS
Uncharacterized protein; Belongs to the cytochrome P450 family.
      
 0.480
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.