STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0G3D6_9BRASKinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (707 aa)    
Predicted Functional Partners:
R0H4F4_9BRAS
Uncharacterized protein.
    
 
 0.982
R0GBI8_9BRAS
Uncharacterized protein.
     
 0.944
R0HP88_9BRAS
Rho-GAP domain-containing protein.
    
 
 0.896
R0HP74_9BRAS
PRONE domain-containing protein.
      
 0.876
R0H3I1_9BRAS
DUF4005 domain-containing protein.
      
 0.839
R0HHW6_9BRAS
Uncharacterized protein.
      
 0.775
R0H641_9BRAS
HORMA domain-containing protein.
   
 0.746
R0H6C8_9BRAS
Peptidase C50 domain-containing protein.
   
 
 0.746
R0IJA4_9BRAS
Uncharacterized protein.
     
 0.738
R0GN59_9BRAS
Uncharacterized protein.
      
 0.710
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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